This paper was an assignment of my introductory biomedical engineering course that I am particularly proud of. This was co-authored by myself and two other students in the class.


To investigate and engineer an intracellular differentiation circuit for pluripotent stem cells based on its spatial and temporal location. With manipulation of cellular distancing and upon activation of bone morphogenetic protein 4 (BMP4), stem cells differentiate into two regions: non-neural brachyury (BRA) and neural sex determining region Y-box 2 (SOX2) positive cells.


The overall goal of this project is to build a one dimensional cell culture that differentiates into certain cell…

An opinion piece surrounding Deep fake AI and its ethical dilemmas; as well as how to mitigate them.


This is a more formal piece of writing, it was written this way since I want to make a real contribution to the discussion of Deep fake AI and all the ethical issues surrounding it. As such, the writing is stylized in a very academic essay style with even a bibliography. As such, the readability might have been sacrificed in an attempt for a more professional submission of thought.


Rene Descartes, a 17th-century philosopher, proposes a thought experiment wherein he suggests that…


I had worked on this project collaboratively with my close friend and colleague, Grant Pausanos, with whom I share equal contribution of work.

My partner and I had started working on this project actively at the start of March 2019 and had finished/presented the project at the of April 2019. This is an old project that I worked on under a short time frame, as such please excuse some of the poor design choices, code, and presentation. Nonetheless, I am proud and grateful of this project for serving as a learning opportunity.

What Is Open Biopipeline

Open Biopipeline is an open source bioinformatics tool for general and broad purposes, specifically the goal of this project is to develop a tool for researchers or students to use in order to investigate genes. This tool combines several popular existing bioinformatic tools, such as BLAST, KEGG, GO, and Protein Atlas, by consolidating them into one singular location. By using this tool you are able to retrieve: function gene annotation, protein function, clinical relevance, specific patient case information, and much more. …

Muhammad Umar Ali

I am an undergraduate student studying biomedical engineering at the University of British Columbia. Check out and my GitHub for more!

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